Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine-n(1)-)-methyltransferase | SHINM13_12980 | A5FHV7 | - | 1506419 - 1507096 | 25417.4 |
| peptidyl-prolyl cis-trans isomerase | SHINM13_12990 | O66105 | + | 1507352 - 1508284 | 33515.6 |
| carboxypeptidase | SHINM13_13000 | Q9SV04 | + | 1508438 - 1509979 | 57754.9 |
| dna-binding protein | SHINM13_13010 | Not Available | - | 1510038 - 1510418 | 15055.4 |
| abc transporter | SHINM13_13020 | P77265 | - | 1510486 - 1512264 | 66984.2 |
| n utilization substance protein b | SHINM13_13030 | Q2S6K8 | + | 1512476 - 1513387 | 35268.4 |
| preprotein translocase subunit yajc | SHINM13_13040 | Q9KDI4 | + | 1513414 - 1513686 | 10200.8 |
| peptidase t | SHINM13_13050 | Q5KZ39 | - | 1513739 - 1514977 | 45904.1 |
| hypothetical protein | SHINM13_13060 | Not Available | - | 1515078 - 1515527 | 17098.4 |
| dihydrolipoyl dehydrogenase | SHINM13_13070 | O05940 | - | 1515679 - 1517067 | 49326.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
