Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate dehydrogenase (quinone) | SHINM13_12780 | A6H0L5 | + | 1477548 - 1478567 | 37617.7 |
| hydroxymethylglutaryl-coa lyase | SHINM13_12790 | D4A5C3 | + | 1478616 - 1479479 | 31456.4 |
| inosine-5'-monophosphate dehydrogenase | SHINM13_12800 | P21879 | + | 1479573 - 1481045 | 52086.4 |
| adenylosuccinate lyase | SHINM13_12810 | Q54J34 | - | 1481216 - 1482562 | 50927.1 |
| trna (guanosine(18)-2'-o)-methyltransferase | SHINM13_12820 | O51081 | + | 1482632 - 1483291 | 25340.2 |
| alkaline phosphatase family protein | SHINM13_12830 | Q9KJX5 | + | 1483413 - 1485026 | 60705.0 |
| diaminopimelate decarboxylase | SHINM13_12840 | O27390 | - | 1485085 - 1486350 | 47441.1 |
| dihydropyrimidine dehydrogenase subunit a | SHINM13_12850 | P9WN18 | - | 1486477 - 1487931 | 52799.1 |
| glutamate synthase subunit alpha | SHINM13_12860 | P55037 | - | 1488037 - 1492569 | 167353.0 |
| succinate--coa ligase | SHINM13_12870 | A6GY30 | + | 1492926 - 1494173 | 45254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
