Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | SHINM13_12110 | Q5HGK2 | - | 1412015 - 1412698 | 24628.3 |
| tigr03643 family protein | SHINM13_12120 | Not Available | - | 1412711 - 1412989 | 11285.8 |
| abc transporter | SHINM13_12130 | Q54IH6 | - | 1412989 - 1414296 | 50021.0 |
| hypothetical protein | SHINM13_12140 | Not Available | - | 1414297 - 1414956 | 25749.9 |
| nad-dependent epimerase | SHINM13_12150 | O31574 | + | 1415068 - 1415991 | 33619.7 |
| hypothetical protein | SHINM13_12160 | Not Available | - | 1415993 - 1416484 | 18529.6 |
| dna recombination protein rmuc | SHINM13_12170 | Q9I4U3 | - | 1416644 - 1417981 | 51086.4 |
| pseudouridine synthase | SHINM13_12180 | P75966 | + | 1418094 - 1418672 | 22086.0 |
| putative trna (cytidine(34)-2'-o)-methyltransferase | SHINM13_12190 | Q042B4 | + | 1418677 - 1419132 | 17077.5 |
| abc transporter atp-binding protein | SHINM13_12200 | Q58283 | - | 1419138 - 1419923 | 28801.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
