Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nuclease | SHINM13_12010 | Q4L3E5 | + | 1401455 - 1401775 | 12660.8 |
| membrane protein | SHINM13_12020 | Not Available | - | 1401837 - 1402352 | 19682.8 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) | SHINM13_12030 | O28994 | + | 1402841 - 1405696 | 105813.0 |
| merr family transcriptional regulator | SHINM13_12040 | Q50900 | + | 1405843 - 1406739 | 34878.5 |
| phytoene dehydrogenase | SHINM13_12050 | A0A0A1GKA2 | + | 1406763 - 1408238 | 55291.8 |
| phytoene synthase | SHINM13_12060 | P54977 | + | 1408240 - 1409079 | 32220.7 |
| beta-carotene hydroxylase | SHINM13_12070 | P21688 | + | 1409182 - 1409547 | 14609.0 |
| hypothetical protein | SHINM13_12080 | Not Available | + | 1409552 - 1410013 | 17993.9 |
| deoxyribodipyrimidine photo-lyase | SHINM13_12090 | A9CJC9 | + | 1410013 - 1411308 | 50553.6 |
| gtp cyclohydrolase 1 | SHINM13_12100 | B2RIJ1 | - | 1411391 - 1411990 | 22805.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
