Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recf | SHINM13_11430 | A5FNH5 | - | 1345232 - 1346311 | 41618.7 |
| hypothetical protein | SHINM13_11440 | Not Available | + | 1346451 - 1347224 | 28050.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | SHINM13_11450 | A5FNH3 | + | 1347342 - 1347914 | 20919.9 |
| dna mismatch repair protein mutl | SHINM13_11460 | A5FNH2 | + | 1348071 - 1349933 | 69641.9 |
| rhomboid family intramembrane serine protease | SHINM13_11470 | O14364 | + | 1349930 - 1350676 | 27786.0 |
| rhomboid family intramembrane serine protease | SHINM13_11480 | Not Available | + | 1350727 - 1351569 | 31823.5 |
| endonuclease | SHINM13_11490 | Not Available | + | 1351814 - 1352632 | 31878.2 |
| hypothetical protein | SHINM13_11500 | P9WLW4 | - | 1352633 - 1353259 | 24788.4 |
| signal peptidase i | SHINM13_11510 | P57347 | - | 1353313 - 1354860 | 59203.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SHINM13_11520 | A0LZI4 | - | 1354991 - 1355695 | 25718.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
