Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHINM13_10940 | Not Available | - | 1296307 - 1296549 | 9382.39 |
| fad-dependent dehydrogenase | SHINM13_10950 | Q05627 | + | 1296685 - 1298247 | 56692.6 |
| hypothetical protein | SHINM13_10960 | B0K2C2 | - | 1298248 - 1299327 | 41200.2 |
| n-acyl-l-amino acid amidohydrolase | SHINM13_10970 | P58156 | - | 1299343 - 1300644 | 47120.1 |
| peptide methionine sulfoxide reductase msra | SHINM13_10980 | O83641 | - | 1300731 - 1301732 | 37686.0 |
| isopentenyl-diphosphate delta-isomerase | SHINM13_10990 | Q5NWG5 | + | 1301976 - 1302503 | 20925.8 |
| 6-carboxy-5,6,7,8-tetrahydropterin synthase | SHINM13_11000 | Q03393 | + | 1302515 - 1302922 | 15708.7 |
| peroxiredoxin | SHINM13_11010 | Q5S1S6 | + | 1302925 - 1303386 | 16743.2 |
| hypothetical protein | SHINM13_11020 | Not Available | + | 1303508 - 1303804 | 10992.4 |
| Trna-thr | Not Available | Not Available | + | 1303883 - 1303959 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
