Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Intrasporangiaceae
Genus
Phycicoccus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Intrasporangiaceae |
| Genus | Phycicoccus |
| Species | Phycicoccus endophyticus |
| Strain | JP6SC6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phycicoccus endophyticus JP6SC6
Accession NumberCP060712.1
Gene Summary
Adenine Count
423527 bp
Thymine Count
425360 bp
Guanine Count
1199380 bp
Cytosine Count
1190959 bp
Genome Length
3239226 bp
Protein-coding Genes
3041 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein | H9L10_07555 | P44731 | - | 1563480 - 1564706 | 43912.1 |
| abc transporter atp-binding protein | H9L10_07560 | Q1AS06 | - | 1564730 - 1565914 | 42887.9 |
| leucine--trna ligase | H9L10_07565 | A8LX93 | - | 1566072 - 1568987 | 108009.0 |
| multidrug efflux smr transporter | H9L10_07570 | Q9CBP1 | - | 1569149 - 1569475 | 11181.1 |
| tetr/acrr family transcriptional regulator | H9L10_07575 | Not Available | + | 1569548 - 1570105 | 19513.3 |
| glutathione peroxidase | H9L10_07580 | O32770 | + | 1570174 - 1570659 | 17488.7 |
| dna-3-methyladenine glycosylase i | H9L10_07585 | P05100 | + | 1570697 - 1571302 | 22228.4 |
| catalase/peroxidase hpi | H9L10_07590 | A1SF13 | - | 1571371 - 1573572 | 80044.2 |
| transcriptional repressor | H9L10_07595 | P0A583 | - | 1573640 - 1574071 | 15086.8 |
| hypothetical protein | H9L10_07600 | Not Available | - | 1574129 - 1574677 | 18602.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.