Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | B43.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema phagedenis B43.1
Accession NumberCP042818.1
Gene Summary
Adenine Count
1023882 bp
Thymine Count
1002507 bp
Guanine Count
679219 bp
Cytosine Count
666508 bp
Genome Length
3372116 bp
Protein-coding Genes
2890 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | + | 2751048 - 2751122 | Not Available |
| Trna-tyr | Not Available | Not Available | + | 2751130 - 2751211 | Not Available |
| ykgj family cysteine cluster protein | FUT79_12090 | Q9ZMG1 | + | 2751311 - 2751754 | 17427.5 |
| mbl fold metallo-hydrolase | FUT79_12095 | Q973F1 | + | 2751764 - 2752732 | 37345.5 |
| hypothetical protein | FUT79_12100 | Not Available | + | 2752732 - 2752929 | 7779.36 |
| endolytic transglycosylase mltg | FUT79_12105 | O34758 | + | 2752979 - 2754013 | 38154.6 |
| dna primase | FUT79_12110 | O83505 | + | 2754017 - 2755798 | 66782.8 |
| rna polymerase sigma factor rpod | FUT79_12115 | O83506 | + | 2755916 - 2757730 | 70700.7 |
| nucleic acid-binding protein | FUT79_12120 | Not Available | + | 2757742 - 2758560 | 31445.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 2758576 - 2758917 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
