Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | B43.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema phagedenis B43.1
Accession NumberCP042818.1
Gene Summary
Adenine Count
1023882 bp
Thymine Count
1002507 bp
Guanine Count
679219 bp
Cytosine Count
666508 bp
Genome Length
3372116 bp
Protein-coding Genes
2890 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | FUT79_10630 | Q06198 | + | 2402762 - 2403421 | 25430.4 |
| hypothetical protein | FUT79_10635 | Not Available | + | 2403411 - 2403881 | 17907.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | FUT79_10640 | Q46EW4 | - | 2404212 - 2404694 | 17588.5 |
| duf1343 domain-containing protein | FUT79_10645 | P40407 | - | 2404691 - 2405884 | 44753.6 |
| penicillin binding protein pbp4b | FUT79_10650 | O05213 | - | 2405881 - 2407842 | 73419.8 |
| potassium transporter | FUT79_10655 | O32081 | + | 2407951 - 2409669 | 62492.9 |
| trka family potassium uptake protein | FUT79_10660 | P39760 | + | 2410674 - 2411381 | 25722.2 |
| duf3160 domain-containing protein | FUT79_10665 | O83174 | + | 2411391 - 2412032 | 23924.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | FUT79_10670 | P16524 | - | 2412176 - 2413468 | 47999.0 |
| aaa family atpase | FUT79_10675 | P94474 | + | 2413533 - 2414525 | 36384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
