Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | B43.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema phagedenis B43.1
Accession NumberCP042818.1
Gene Summary
Adenine Count
1023882 bp
Thymine Count
1002507 bp
Guanine Count
679219 bp
Cytosine Count
666508 bp
Genome Length
3372116 bp
Protein-coding Genes
2890 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3160 domain-containing protein | FUT79_10080 | Not Available | + | 2265799 - 2265998 | 7723.59 |
| soxr reducing system rsec family protein | FUT79_10085 | Not Available | - | 2266055 - 2266531 | 17043.2 |
| ymdb family metallophosphoesterase | FUT79_10090 | O31775 | - | 2266500 - 2267321 | 29834.1 |
| tetratricopeptide repeat protein | FUT79_10095 | Not Available | - | 2267318 - 2267854 | 20209.0 |
| polyprenyl synthetase family protein | FUT79_10100 | Q58270 | - | 2267933 - 2268967 | 38180.7 |
| lipopolysaccharide biosynthesis protein | FUT79_10105 | Not Available | + | 2269193 - 2270191 | 37215.5 |
| polysaccharide export protein | FUT79_10110 | Not Available | + | 2270188 - 2271687 | 55573.8 |
| duf4954 family protein | FUT79_10115 | O83823 | + | 2272138 - 2274318 | 83146.6 |
| atp-dependent 6-phosphofructokinase | FUT79_10120 | O83146 | - | 2274383 - 2275732 | 49595.9 |
| dde-type integrase/transposase/recombinase | FUT79_10125 | O05086 | - | 2275852 - 2276223 | 14543.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
