Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema phagedenis |
| Strain | B43.1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema phagedenis B43.1
Accession NumberCP042818.1
Gene Summary
Adenine Count
1023882 bp
Thymine Count
1002507 bp
Guanine Count
679219 bp
Cytosine Count
666508 bp
Genome Length
3372116 bp
Protein-coding Genes
2890 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | FUT79_06650 | P39214 | + | 1493935 - 1496061 | 77157.5 |
| hamp domain-containing protein | FUT79_06655 | Q9HW91 | + | 1496078 - 1498201 | 77224.1 |
| flagellar export chaperone flis | FUT79_06660 | P39739 | + | 1498340 - 1498780 | 16153.6 |
| flagellar protein flgn | FUT79_06665 | O83912 | + | 1498783 - 1499262 | 18454.3 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | FUT79_06670 | O83460 | + | 1499325 - 1500452 | 40398.1 |
| hypothetical protein | FUT79_06675 | O83461 | + | 1500449 - 1501573 | 43083.4 |
| rna pseudouridine synthase | FUT79_06680 | O66114 | + | 1501885 - 1502586 | 26118.8 |
| sam-dependent methyltransferase | FUT79_06685 | Q0P5D8 | + | 1502614 - 1503417 | 30247.7 |
| eal domain-containing protein | FUT79_06690 | Q8EJM6 | - | 1504187 - 1504678 | 18654.7 |
| diguanylate cyclase | FUT79_06695 | P77334 | - | 1504641 - 1505471 | 31273.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
