Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | NQ491_04700 | A4J7B3 | - | 1159056 - 1159520 | 17413.7 |
| trar/dksa family transcriptional regulator | NQ491_04705 | P80872 | - | 1159600 - 1159986 | 14586.4 |
| isoleucine--trna ligase | NQ491_04710 | Q5LCU8 | - | 1160080 - 1163517 | 129143.0 |
| dmt family transporter | NQ491_04715 | O29973 | - | 1163677 - 1164591 | 32976.0 |
| hypothetical protein | NQ491_04720 | Not Available | - | 1165025 - 1165225 | 7446.0 |
| m48 family metallopeptidase | NQ491_04725 | P25894 | - | 1165326 - 1166111 | 28255.9 |
| glycine cleavage system aminomethyltransferase gcvt | NQ491_04730 | A6L8T3 | + | 1166186 - 1167295 | 40363.2 |
| hypothetical protein | NQ491_04735 | Not Available | - | 1167776 - 1168291 | 19514.5 |
| aspartate aminotransferase family protein | NQ491_04740 | Q8TUE8 | - | 1168368 - 1169567 | 43896.0 |
| pyrophosphatase | NQ491_04745 | P42979 | - | 1170186 - 1170497 | 11393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.