Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5689 domain-containing protein | NQ491_04650 | Not Available | - | 1144605 - 1145429 | 30220.6 |
| duf5689 domain-containing protein | NQ491_04655 | Not Available | - | 1145410 - 1146474 | 38159.9 |
| tonb-dependent receptor | NQ491_04660 | Not Available | - | 1146918 - 1149392 | 90921.9 |
| bacon domain-containing protein | NQ491_04665 | Not Available | + | 1150022 - 1151224 | 43891.3 |
| hypothetical protein | NQ491_04670 | Not Available | + | 1151332 - 1152393 | 40048.9 |
| gatb/yqey domain-containing protein | NQ491_04675 | P54464 | - | 1153044 - 1153493 | 15872.4 |
| hypothetical protein | NQ491_04680 | Not Available | + | 1153641 - 1156328 | 101267.0 |
| duf4840 domain-containing protein | NQ491_04685 | Not Available | - | 1157422 - 1157946 | 18932.0 |
| Trna-lys | Not Available | Not Available | + | 1158592 - 1158667 | Not Available |
| tyrosine-type recombinase/integrase | NQ491_04695 | Not Available | - | 1158821 - 1158989 | 6121.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.