Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | NQ491_03895 | Not Available | - | 984534 - 985250 | 26160.3 |
| tolc family protein | NQ491_03900 | Q8CWA4 | - | 985444 - 986829 | 50292.9 |
| efflux rnd transporter permease subunit | NQ491_03905 | Q8G2M6 | - | 986855 - 990028 | 115060.0 |
| efflux rnd transporter periplasmic adaptor subunit | NQ491_03910 | Q8X4L0 | - | 990061 - 991260 | 42295.8 |
| m48 family metallopeptidase | NQ491_03915 | P25894 | + | 991937 - 992737 | 28810.2 |
| adenine nucleotide alpha hydrolase | NQ491_03920 | Not Available | - | 993126 - 993833 | 25975.8 |
| duf2284 domain-containing protein | NQ491_03925 | Not Available | - | 993827 - 994438 | 22825.1 |
| ai-2e family transporter | NQ491_03930 | O66948 | + | 994996 - 996081 | 40351.2 |
| duf748 domain-containing protein | NQ491_03935 | Not Available | - | 996584 - 998236 | 61719.9 |
| 5s ribosomal rna | Not Available | Not Available | + | 999242 - 999354 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.