Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 78 protein | NQ491_03645 | Q82PP4 | - | 913876 - 916656 | 103935.0 |
| sugar phosphate isomerase/epimerase | NQ491_03650 | Q6D5T7 | - | 916739 - 917710 | 36930.8 |
| hemolysin family protein | NQ491_03655 | P74409 | + | 917908 - 919194 | 47247.4 |
| hypothetical protein | NQ491_03660 | Not Available | - | 919363 - 919647 | 10332.1 |
| s-methyl-5-thioribose-1-phosphate isomerase | NQ491_03665 | Q67MP0 | - | 919804 - 920886 | 39111.6 |
| nadph-dependent glutamate synthase | NQ491_03670 | Q8U195 | - | 920991 - 922391 | 49883.8 |
| sulfide/dihydroorotate dehydrogenase-like fad/nad-binding protein | NQ491_03675 | P25981 | - | 922458 - 923342 | 32560.5 |
| duf1573 domain-containing protein | NQ491_03680 | Not Available | - | 923413 - 924498 | 39479.5 |
| biotin synthase biob | NQ491_03685 | A6LD84 | - | 924573 - 925532 | 35430.6 |
| dethiobiotin synthase | NQ491_03690 | Q9JV95 | + | 925601 - 926263 | 24230.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.