Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteate synthase | NQ491_03445 | D1Z042 | + | 861065 - 862360 | 48007.3 |
| hypothetical protein | NQ491_03450 | Not Available | - | 863268 - 863663 | 14119.8 |
| dipeptidase | NQ491_03455 | Q9P6I2 | - | 864267 - 865634 | 50231.0 |
| lysr family transcriptional regulator | NQ491_03460 | P48271 | - | 865984 - 866886 | 32978.9 |
| phosphoglucosamine mutase | NQ491_03465 | Q68BJ6 | - | 867283 - 868674 | 49343.1 |
| nucleoside phosphorylase | NQ491_03470 | Q5JJC1 | + | 869618 - 870496 | 32542.0 |
| dna polymerase iii subunit beta | NQ491_03475 | P52023 | + | 870631 - 871758 | 41295.6 |
| 3'-5' exonuclease | NQ491_03480 | Q8RA32 | + | 872031 - 872804 | 29475.3 |
| lysm peptidoglycan-binding domain-containing protein | NQ491_03485 | Q2G0D4 | + | 873323 - 875158 | 67839.5 |
| metallophosphoesterase | NQ491_03490 | O34986 | + | 875467 - 876558 | 41095.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.