Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 88): tacaaatggcaataatag | Not Available | Not Available | + | 846296 - 846696 | Not Available |
| gnat family n-acetyltransferase | NQ491_03400 | P21340 | + | 846924 - 847424 | 19368.4 |
| hypothetical protein | NQ491_03405 | Not Available | - | 847746 - 850010 | 85285.8 |
| atp-binding cassette domain-containing protein | NQ491_03410 | O34814 | + | 850513 - 851253 | 27964.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | NQ491_03415 | P05652 | + | 851386 - 853347 | 73011.4 |
| duf4251 domain-containing protein | NQ491_03420 | Not Available | - | 854052 - 854552 | 18356.1 |
| dha2 family efflux mfs transporter permease subunit | NQ491_03425 | P54585 | - | 854701 - 856155 | 52357.0 |
| bifunctional methionine sulfoxide reductase b/a protein | NQ491_03430 | O83641 | - | 856332 - 857183 | 31924.2 |
| ppx/gppa family phosphatase | NQ491_03435 | P65787 | - | 857794 - 858705 | 33869.0 |
| rna degradosome polyphosphate kinase | NQ491_03440 | Q7MNJ0 | - | 858734 - 860770 | 77967.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.