Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | NQ491_03245 | P07945 | - | 806645 - 807304 | 25392.2 |
| rna-binding protein | NQ491_03250 | Q9WX37 | - | 807537 - 807839 | 11131.9 |
| cold shock domain-containing protein | NQ491_03255 | Q9KN00 | - | 807872 - 808312 | 16507.4 |
| dead/deah box helicase | NQ491_03260 | P25888 | - | 808339 - 809538 | 43950.4 |
| dknyy domain-containing protein | NQ491_03265 | Not Available | - | 810164 - 810739 | 20267.6 |
| (4fe-4s)-binding protein | NQ491_03270 | P0AF60 | - | 810853 - 811083 | 8631.57 |
| n-acetyltransferase | NQ491_03275 | Q9DBW3 | - | 811130 - 811417 | 10942.4 |
| tolc family protein | NQ491_03280 | P02930 | - | 811859 - 813172 | 49893.1 |
| efflux rnd transporter permease subunit | NQ491_03285 | Q57124 | - | 813169 - 816198 | 111538.0 |
| efflux rnd transporter periplasmic adaptor subunit | NQ491_03290 | Q57500 | - | 816211 - 817284 | 38646.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.