Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase | NQ491_03145 | A6L0E8 | + | 780831 - 782369 | 57929.1 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | NQ491_03150 | A0M0D0 | - | 782868 - 783341 | 18002.8 |
| glycoside hydrolase family 2 | NQ491_03155 | Q56307 | - | 783338 - 784939 | 58683.0 |
| ribosome biogenesis gtpase der | NQ491_03160 | A6KXK1 | - | 785056 - 786360 | 48795.0 |
| duf4954 family protein | NQ491_03165 | O83823 | - | 786740 - 788587 | 66766.9 |
| hypothetical protein | NQ491_03170 | Not Available | + | 788934 - 789863 | 34191.1 |
| asparagine--trna ligase | NQ491_03175 | Q11Q97 | + | 790127 - 791521 | 52838.2 |
| rna polymerase factor sigma-54 | NQ491_03180 | A0A0H2ZGR9 | + | 791682 - 793106 | 54868.4 |
| hypothetical protein | NQ491_03185 | Not Available | + | 793501 - 794118 | 21977.1 |
| glycoside hydrolase family 2 | NQ491_03190 | T2KM09 | + | 794213 - 796051 | 69178.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.