Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | NQ491_01945 | O34569 | + | 476523 - 476879 | 14039.4 |
| outer membrane beta-barrel protein | NQ491_01950 | Not Available | - | 477017 - 479887 | 105591.0 |
| lyttr family dna-binding domain-containing protein | NQ491_01955 | Q82Z76 | - | 480599 - 481348 | 28620.7 |
| hypothetical protein | NQ491_01960 | Not Available | - | 481369 - 483609 | 83383.2 |
| histidine kinase | NQ491_01965 | P0AD15 | - | 483709 - 484743 | 39844.4 |
| gamma carbonic anhydrase family protein | NQ491_01970 | Q9C6B3 | - | 484891 - 485406 | 18437.2 |
| nucleoside triphosphate pyrophosphohydrolase | NQ491_01975 | P44723 | - | 485717 - 486520 | 31068.8 |
| duf1343 domain-containing protein | NQ491_01980 | P40407 | + | 486678 - 487841 | 43563.6 |
| family 20 glycosylhydrolase | NQ491_01985 | P49008 | + | 487831 - 490320 | 94270.7 |
| hypothetical protein | NQ491_01990 | Not Available | + | 490384 - 491325 | 36049.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.