Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| port family protein | NQ491_01895 | Not Available | - | 465867 - 467117 | 45511.6 |
| sigma-70 family rna polymerase sigma factor | NQ491_01900 | Q06198 | - | 467134 - 467667 | 20288.5 |
| dihydrofolate reductase family protein | NQ491_01905 | O28272 | + | 467859 - 468974 | 40774.7 |
| tetr/acrr family transcriptional regulator | NQ491_01910 | O07001 | + | 469200 - 469784 | 21869.5 |
| tolc family protein | NQ491_01915 | J7RET5 | + | 469810 - 471246 | 52990.7 |
| hlyd family efflux transporter periplasmic adaptor subunit | NQ491_01920 | Q9ZJD1 | + | 471283 - 472269 | 35980.3 |
| abc transporter permease | NQ491_01925 | P37624 | + | 472390 - 473565 | 43715.5 |
| abc transporter permease | NQ491_01930 | P0AFQ0 | + | 473562 - 474764 | 45115.8 |
| gfo/idh/moca family oxidoreductase | NQ491_01935 | O32223 | + | 474811 - 475842 | 38722.2 |
| large-conductance mechanosensitive channel protein mscl | NQ491_01940 | A6L898 | + | 475924 - 476358 | 15642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.