Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase rfba | NQ491_07750 | P55255 | - | 1910211 - 1911104 | 33027.6 |
| upxy family transcription antiterminator | NQ491_07755 | Not Available | - | 1911340 - 1911897 | 21362.0 |
| hypothetical protein | NQ491_07760 | Not Available | + | 1912777 - 1913157 | 14478.6 |
| hypothetical protein | NQ491_07765 | Not Available | + | 1913607 - 1914272 | 24911.4 |
| m48 family metallopeptidase | NQ491_07770 | Q9LSC4 | + | 1914320 - 1915102 | 29264.2 |
| hypothetical protein | NQ491_07775 | Not Available | + | 1915112 - 1916116 | 36790.3 |
| tetratricopeptide repeat protein | NQ491_07780 | Not Available | + | 1916360 - 1917142 | 29789.7 |
| polymer-forming cytoskeletal protein | NQ491_07785 | Not Available | + | 1917328 - 1918287 | 33727.9 |
| glycoside hydrolase family 2 | NQ491_07790 | Q6LL68 | + | 1918621 - 1920477 | 69012.5 |
| dna primase | NQ491_07795 | Q9KD44 | - | 1920898 - 1922850 | 73033.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.