Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | + | 1489975 - 1490057 | Not Available |
| Trna-thr | Not Available | Not Available | + | 1490138 - 1490211 | Not Available |
| secondary thiamine-phosphate synthase enzyme yjbq | NQ491_06110 | P0AF49 | + | 1490650 - 1491060 | 14996.0 |
| anaerobic ribonucleoside-triphosphate reductase | NQ491_06115 | Q9Z6S5 | + | 1492087 - 1494234 | 81763.7 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | NQ491_06120 | Not Available | + | 1494228 - 1494779 | 20108.8 |
| ribonuclease r | NQ491_06125 | O32231 | - | 1495021 - 1497216 | 83382.9 |
| glycosyl hydrolase | NQ491_06130 | T2KNA8 | - | 1497436 - 1499769 | 86200.4 |
| ribosome-associated translation inhibitor raia | NQ491_06135 | P28613 | - | 1500323 - 1500616 | 11273.7 |
| tyrosine-type recombinase/integrase | NQ491_06140 | B4SDZ2 | - | 1500629 - 1501618 | 37083.8 |
| 30s ribosomal protein s21 | NQ491_06145 | A6LE91 | - | 1501729 - 1501920 | 7705.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.