Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 | NQ491_06000 | Q11QA8 | - | 1465582 - 1465974 | 14293.6 |
| hypothetical protein | NQ491_06005 | Not Available | + | 1466314 - 1466679 | 13223.6 |
| porin | NQ491_06010 | Not Available | - | 1466946 - 1468097 | 42899.0 |
| aaa family atpase | NQ491_06015 | Not Available | + | 1468277 - 1469500 | 44821.1 |
| hypothetical protein | NQ491_06020 | Not Available | - | 1469550 - 1469819 | 9042.98 |
| lysophospholipid acyltransferase family protein | NQ491_06025 | Not Available | - | 1470008 - 1471777 | 67301.4 |
| excinuclease abc subunit uvrc | NQ491_06030 | A6GW65 | + | 1471922 - 1473898 | 74429.4 |
| adenosine kinase | NQ491_06035 | Q55480 | + | 1474200 - 1475201 | 36111.5 |
| deda family protein | NQ491_06040 | P44005 | + | 1475686 - 1476138 | 16889.8 |
| dna-directed rna polymerase subunit beta' | NQ491_06045 | A6LE80 | - | 1476972 - 1481231 | 158144.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.