Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein/permease | NQ491_05800 | Q2LVL0 | - | 1435519 - 1437345 | 68334.0 |
| tryptophan--trna ligase | NQ491_05805 | Q7MT94 | + | 1437478 - 1438467 | 36758.4 |
| chloride channel protein | NQ491_05810 | Q8XTT4 | + | 1438657 - 1440444 | 65718.5 |
| m56 family metallopeptidase | NQ491_05815 | Not Available | - | 1440556 - 1441791 | 45788.4 |
| blai/meci/copy family transcriptional regulator | NQ491_05820 | P06555 | - | 1441842 - 1442249 | 15628.9 |
| tlpa family protein disulfide reductase | NQ491_05825 | Not Available | - | 1442554 - 1444938 | 91061.0 |
| duf975 family protein | NQ491_05830 | Not Available | - | 1445207 - 1445827 | 23379.2 |
| phosphopyruvate hydratase | NQ491_05835 | Q5LG64 | - | 1445997 - 1447301 | 46319.2 |
| 50s ribosomal protein l17 | NQ491_05840 | A0M572 | - | 1447479 - 1448084 | 21681.0 |
| dna-directed rna polymerase subunit alpha | NQ491_05845 | A6KYH0 | - | 1448148 - 1449140 | 37246.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.