Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage portal protein | NQ491_05600 | Not Available | + | 1391854 - 1393068 | 45907.2 |
| hypothetical protein | NQ491_05605 | Not Available | + | 1393081 - 1393563 | 17905.4 |
| phage holin family protein | NQ491_05610 | Not Available | + | 1393560 - 1393979 | 15625.4 |
| lytic transglycosylase domain-containing protein | NQ491_05615 | Not Available | + | 1393976 - 1394473 | 18588.3 |
| hypothetical protein | NQ491_05620 | Not Available | + | 1394448 - 1394945 | 18880.6 |
| leucine-rich repeat domain-containing protein | NQ491_05625 | Not Available | - | 1395634 - 1396374 | 27547.9 |
| hypothetical protein | NQ491_05630 | Q71VU0 | - | 1396424 - 1397410 | 35360.4 |
| hypothetical protein | NQ491_05635 | Not Available | + | 1397640 - 1398620 | 38365.0 |
| Trna-leu | Not Available | Not Available | + | 1399182 - 1399267 | Not Available |
| Trna-leu | Not Available | Not Available | + | 1399314 - 1399398 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.