Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | NQ491_05300 | P54459 | + | 1319255 - 1320349 | 41299.2 |
| rhomboid family intramembrane serine protease | NQ491_05305 | Q9FZ81 | + | 1320346 - 1320963 | 23338.4 |
| aminotransferase class iv | NQ491_05310 | Not Available | + | 1320972 - 1321796 | 31037.6 |
| hypothetical protein | NQ491_05315 | Not Available | - | 1321921 - 1323213 | 49294.5 |
| tetr/acrr family transcriptional regulator | NQ491_05320 | A0R4Z6 | - | 1323333 - 1323962 | 24468.3 |
| amidophosphoribosyltransferase | NQ491_05325 | Q9V253 | - | 1324088 - 1325509 | 53306.9 |
| sugar mfs transporter | NQ491_05330 | Q2YIJ8 | - | 1325924 - 1327180 | 45421.9 |
| phosphoserine phosphatase serb | NQ491_05335 | Q9S281 | - | 1327213 - 1328451 | 46015.6 |
| arac family transcriptional regulator | NQ491_05340 | O33813 | - | 1328765 - 1329685 | 35264.9 |
| hypothetical protein | NQ491_05345 | Not Available | - | 1330021 - 1330293 | 9417.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.