Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt domain-containing protein | NQ491_05250 | Q0VRG6 | - | 1303622 - 1305007 | 51202.4 |
| putative porin | NQ491_05255 | Not Available | - | 1305038 - 1307047 | 77349.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | NQ491_05260 | Q48269 | - | 1307213 - 1307920 | 25541.0 |
| mannose-1-phosphate guanylyltransferase | NQ491_05265 | Q01410 | + | 1308243 - 1309328 | 40944.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | NQ491_05270 | P96613 | + | 1309436 - 1310713 | 46438.3 |
| transketolase | NQ491_05275 | Q9KAD7 | - | 1311546 - 1313576 | 73525.7 |
| nad(p)-dependent oxidoreductase | NQ491_05280 | P71037 | + | 1313914 - 1314564 | 23672.6 |
| trna lysidine(34) synthetase tils | NQ491_05285 | Q8A7D1 | - | 1314916 - 1316268 | 50675.8 |
| udp-n-acetylmuramate dehydrogenase | NQ491_05290 | Q7NXN4 | - | 1316272 - 1317303 | 37506.2 |
| duf4301 family protein | NQ491_05295 | Not Available | + | 1317433 - 1318899 | 54943.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.