Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s49 family peptidase | NQ491_04900 | P54465 | - | 1206911 - 1208323 | 50319.4 |
| magnesium and cobalt transport protein cora | NQ491_04905 | Q7M9C0 | - | 1208380 - 1209330 | 36651.4 |
| menaquinone biosynthesis protein | NQ491_04910 | Q9L0T8 | - | 1209401 - 1210171 | 28801.7 |
| rna methyltransferase | NQ491_04915 | O51081 | - | 1210609 - 1211292 | 25691.7 |
| ribosome small subunit-dependent gtpase a | NQ491_04920 | Q8A5I9 | - | 1211270 - 1212208 | 34340.8 |
| cvpa family protein | NQ491_04925 | Not Available | - | 1212211 - 1212717 | 17912.3 |
| duf4982 domain-containing protein | NQ491_04930 | T2KPJ7 | + | 1213209 - 1215212 | 75610.9 |
| hypothetical protein | NQ491_04935 | Not Available | - | 1215441 - 1216145 | 26215.5 |
| helix-turn-helix domain-containing protein | NQ491_04940 | Not Available | + | 1217212 - 1217472 | 9959.12 |
| wbqc family protein | NQ491_04945 | Not Available | - | 1217935 - 1218585 | 24772.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.