Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | NQ491_04600 | O51526 | - | 1129573 - 1133196 | 136171.0 |
| duf2007 domain-containing protein | NQ491_04605 | Not Available | + | 1133371 - 1133637 | 9584.31 |
| deoxyhypusine synthase family protein | NQ491_04610 | O28088 | - | 1134440 - 1135414 | 36632.8 |
| gtpase era | NQ491_04615 | B3ETC6 | - | 1136089 - 1136970 | 33505.4 |
| zn-dependent alcohol dehydrogenase | NQ491_04620 | Q0KDL6 | + | 1137702 - 1138742 | 38194.0 |
| tyrosine-type recombinase/integrase | NQ491_04625 | Not Available | - | 1138976 - 1139199 | 8553.23 |
| hypothetical protein | NQ491_04630 | Not Available | + | 1139450 - 1140904 | 55964.9 |
| duf4890 domain-containing protein | NQ491_04635 | Not Available | - | 1141419 - 1141889 | 17562.0 |
| dna/rna non-specific endonuclease | NQ491_04640 | P38446 | - | 1142174 - 1143082 | 34084.8 |
| gtpase obge | NQ491_04645 | A6LD68 | + | 1143429 - 1144427 | 36155.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.