Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | NQ491_04550 | Not Available | + | 1120451 - 1120876 | 15460.1 |
| thioredoxin | NQ491_04555 | O51088 | - | 1121222 - 1121692 | 17474.3 |
| duf6132 family protein | NQ491_04560 | Not Available | - | 1121917 - 1122132 | 7822.58 |
| winged helix dna-binding protein | NQ491_04565 | Not Available | - | 1122140 - 1122511 | 13780.8 |
| hypothetical protein | NQ491_04570 | Not Available | - | 1123045 - 1123410 | 13898.5 |
| hypothetical protein | NQ491_04575 | Not Available | - | 1123705 - 1123887 | 6584.02 |
| hypothetical protein | NQ491_04580 | Not Available | - | 1124451 - 1125173 | 28128.4 |
| alpha/beta hydrolase | NQ491_04585 | D5EV35 | + | 1126446 - 1127315 | 32167.1 |
| alpha/beta hydrolase | NQ491_04590 | D5EV35 | + | 1127766 - 1128665 | 32948.1 |
| thioredoxin | NQ491_04595 | P0A4L1 | - | 1129125 - 1129439 | 11293.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.