Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | NQ491_04450 | J8H9C1 | - | 1096739 - 1098814 | 78923.9 |
| fic family protein | NQ491_04455 | Q23544 | - | 1098960 - 1100033 | 41245.2 |
| tyrosine-type recombinase/integrase | NQ491_04460 | Not Available | + | 1100487 - 1101462 | 35238.6 |
| metalloproteinase | NQ491_04465 | Not Available | + | 1101776 - 1102195 | 15628.8 |
| tyrosine-type recombinase/integrase | NQ491_04470 | Not Available | + | 1102192 - 1102392 | 7635.32 |
| helix-turn-helix domain-containing protein | NQ491_04475 | Not Available | + | 1103221 - 1103541 | 12003.1 |
| atp-binding protein | NQ491_04480 | Q60260 | + | 1103661 - 1105034 | 52666.8 |
| site-specific dna-methyltransferase | NQ491_04485 | P11409 | + | 1105099 - 1105983 | 33873.0 |
| site-specific dna-methyltransferase | NQ491_04490 | P11409 | + | 1105970 - 1107298 | 49856.6 |
| dead/deah box helicase family protein | NQ491_04495 | Q5V5F7 | + | 1107295 - 1109415 | 80669.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.