Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| had-iiia family hydrolase | NQ491_03845 | Q8AAI7 | + | 968945 - 969427 | 18617.1 |
| duf3078 domain-containing protein | NQ491_03850 | Not Available | - | 969639 - 970508 | 32792.9 |
| nramp family divalent metal transporter | NQ491_03855 | Q0BW85 | - | 971066 - 972328 | 46163.5 |
| mgtc/sapb family protein | NQ491_03860 | P0AFV3 | - | 972500 - 973174 | 24501.1 |
| Trna-glu | Not Available | Not Available | + | 974088 - 974159 | Not Available |
| rlua family pseudouridine synthase | NQ491_03870 | Q45480 | - | 974301 - 975170 | 32732.4 |
| glycosyl hydrolase | NQ491_03875 | T2KNA8 | + | 975586 - 977823 | 83735.0 |
| hypothetical protein | NQ491_03880 | Not Available | + | 978092 - 978739 | 23640.8 |
| duf1080 domain-containing protein | NQ491_03885 | Not Available | - | 979735 - 983154 | 121311.0 |
| gfo/idh/moca family oxidoreductase | NQ491_03890 | B5F3F4 | - | 983181 - 984434 | 47128.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.