Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | NQ491_03195 | A6L7J9 | - | 797013 - 797570 | 21319.5 |
| holliday junction resolvase ruvx | NQ491_03200 | Q7MT06 | - | 797588 - 798040 | 16407.1 |
| glycoside hydrolase family 43 protein | NQ491_03205 | B3EYM8 | + | 798190 - 799182 | 36915.6 |
| glycine--trna ligase | NQ491_03210 | Q8KAB1 | + | 799215 - 800756 | 59362.7 |
| hypothetical protein | NQ491_03215 | Not Available | + | 801112 - 801993 | 33284.8 |
| pantetheine-phosphate adenylyltransferase | NQ491_03220 | A6GXD6 | + | 802483 - 802953 | 17828.8 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | NQ491_03225 | Q7MXT7 | + | 802985 - 804037 | 37301.7 |
| crossover junction endodeoxyribonuclease ruvc | NQ491_03230 | Q5LAS7 | + | 804065 - 804658 | 21323.8 |
| Trna-arg | Not Available | Not Available | + | 805355 - 805428 | Not Available |
| site-specific integrase | NQ491_03240 | Not Available | + | 805542 - 806375 | 32404.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.