Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | NQ491_03095 | P74038 | - | 768798 - 769541 | 26924.3 |
| hypothetical protein | NQ491_03100 | Not Available | - | 769550 - 770545 | 34819.6 |
| nyn domain-containing protein | NQ491_03105 | P18395 | + | 770911 - 771831 | 34835.7 |
| family 78 glycoside hydrolase catalytic domain | NQ491_03110 | T2KNB2 | + | 771913 - 774252 | 88060.2 |
| glycosyltransferase family protein | NQ491_03115 | Not Available | - | 774891 - 775676 | 30701.5 |
| glycosyl transferase | NQ491_03120 | Q10323 | - | 775838 - 776464 | 24657.6 |
| redox-regulated atpase ychf | NQ491_03125 | P37518 | + | 776641 - 777738 | 40167.9 |
| mfs transporter | NQ491_03130 | Q2YIJ8 | + | 777777 - 778964 | 42479.7 |
| carbohydrate kinase | NQ491_03135 | D9TT10 | + | 778971 - 779864 | 32586.0 |
| simpl domain-containing protein | NQ491_03140 | Not Available | + | 780083 - 780814 | 26966.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.