Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_02945 | Not Available | + | 730923 - 731855 | 35880.5 |
| 2-isopropylmalate synthase | NQ491_02950 | Q8F3Q1 | - | 732265 - 733794 | 57304.4 |
| 3-isopropylmalate dehydratase small subunit | NQ491_02955 | A0M367 | - | 734040 - 734633 | 22123.1 |
| 3-isopropylmalate dehydratase large subunit | NQ491_02960 | Q8A6L7 | - | 734665 - 736068 | 50464.1 |
| 2-isopropylmalate synthase | NQ491_02965 | A6LDN1 | - | 736090 - 737604 | 54719.8 |
| dna repair protein recn | NQ491_02970 | A5F379 | - | 737917 - 739581 | 60695.5 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | NQ491_02975 | A0A2I9 | - | 739656 - 740858 | 43390.3 |
| dna-directed rna polymerase subunit omega | NQ491_02980 | Not Available | - | 740877 - 741221 | 13108.4 |
| outer membrane protein assembly factor bamd | NQ491_02985 | Q9A6U9 | - | 741202 - 742080 | 33468.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | NQ491_02990 | A7BFV7 | + | 742442 - 743695 | 46667.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.