Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid a phosphoethanolamine transferase | NQ491_02795 | A0A0H3JML2 | - | 689477 - 691210 | 65273.2 |
| bama/tama family outer membrane protein | NQ491_02800 | Not Available | - | 691273 - 692541 | 48285.4 |
| ytfj family protein | NQ491_02805 | Not Available | - | 692638 - 693165 | 19897.0 |
| family 78 glycoside hydrolase catalytic domain | NQ491_02810 | Not Available | - | 693338 - 695677 | 88128.5 |
| l-fucose/l-arabinose isomerase family protein | NQ491_02815 | A1SDP0 | - | 696023 - 697426 | 50847.2 |
| arac family transcriptional regulator | NQ491_02820 | P28809 | - | 697588 - 698508 | 34824.6 |
| kpsf/gutq family sugar-phosphate isomerase | NQ491_02825 | P45313 | - | 699074 - 700027 | 34302.7 |
| gntr family transcriptional regulator | NQ491_02830 | O32152 | - | 700081 - 700788 | 26363.8 |
| 2-oxo acid dehydrogenase subunit e2 | NQ491_02835 | O31550 | + | 701090 - 702430 | 46529.8 |
| dihydrolipoyl dehydrogenase | NQ491_02840 | P52992 | + | 702552 - 703916 | 48394.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.