Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pd-(d/e)xk nuclease family protein | NQ491_02645 | B9DRU9 | - | 647872 - 650724 | 109226.0 |
| duf2807 domain-containing protein | NQ491_02650 | Not Available | - | 650812 - 651504 | 24375.3 |
| uvrd-helicase domain-containing protein | NQ491_02655 | P45157 | + | 651688 - 654846 | 118911.0 |
| tyrosine-type recombinase/integrase | NQ491_02660 | Not Available | - | 655140 - 655399 | 9578.4 |
| phosphodiester glycosidase family protein | NQ491_02665 | Not Available | - | 655443 - 656759 | 46954.9 |
| translation elongation factor ts | NQ491_02670 | A0LXM7 | - | 657230 - 658051 | 29435.7 |
| 30s ribosomal protein s2 | NQ491_02675 | A6L0V1 | - | 658084 - 658971 | 32118.7 |
| 30s ribosomal protein s9 | NQ491_02680 | A6LHM6 | - | 659147 - 659533 | 14313.6 |
| 50s ribosomal protein l13 | NQ491_02685 | C5C020 | - | 659539 - 659994 | 16516.1 |
| nitroreductase family protein | NQ491_02690 | O26223 | - | 660284 - 660910 | 23747.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.