Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c1 family peptidase | NQ491_02595 | Q56115 | - | 634330 - 635541 | 45311.7 |
| capa family protein | NQ491_02600 | P19579 | - | 635765 - 636916 | 42552.1 |
| tatd family hydrolase | NQ491_02605 | P39408 | + | 636968 - 637600 | 23783.1 |
| trna threonylcarbamoyladenosine dehydratase | NQ491_02610 | O32037 | + | 637597 - 638361 | 27870.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | NQ491_02615 | Q5LIL0 | - | 638624 - 640147 | 56155.0 |
| alanine--trna ligase | NQ491_02620 | Q8A0M6 | - | 640203 - 642827 | 97858.7 |
| m23 family metallopeptidase | NQ491_02625 | P0AFT0 | + | 642933 - 643901 | 36685.3 |
| m23 family metallopeptidase | NQ491_02630 | P44693 | + | 643906 - 644880 | 37860.1 |
| glutamine synthetase iii | NQ491_02635 | P15623 | + | 645001 - 647187 | 82624.0 |
| hypothetical protein | NQ491_02640 | Not Available | - | 647735 - 647875 | 5487.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.