Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_02495 | Not Available | - | 608709 - 609731 | 37354.2 |
| hypothetical protein | NQ491_02500 | Not Available | - | 609816 - 610253 | 16194.4 |
| hypothetical protein | NQ491_02505 | Not Available | - | 610275 - 611213 | 34654.8 |
| ragb/susd family nutrient uptake outer membrane protein | NQ491_02510 | Not Available | - | 611250 - 612971 | 65193.4 |
| susc/raga family tonb-linked outer membrane protein | NQ491_02515 | T2KPJ3 | - | 612992 - 615874 | 107349.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ491_02520 | T2KN63 | - | 615903 - 617735 | 69903.3 |
| hypothetical protein | NQ491_02525 | T2KM18 | - | 617755 - 618327 | 21939.9 |
| susc/raga family tonb-linked outer membrane protein | NQ491_02530 | Q8A1G1 | - | 618338 - 620848 | 92884.8 |
| helix-turn-helix domain-containing protein | NQ491_02535 | T2KMF4 | + | 621520 - 623304 | 67531.9 |
| zinc abc transporter substrate-binding protein | NQ491_02540 | Q8CWN2 | + | 623421 - 624281 | 31837.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.