Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_02445 | Not Available | - | 593734 - 594006 | 10164.1 |
| hypothetical protein | NQ491_02450 | Not Available | - | 594160 - 594666 | 17839.7 |
| rela/spot family protein | NQ491_02455 | O54408 | - | 594673 - 596901 | 84397.8 |
| recombinase reca | NQ491_02460 | Q45791 | - | 596952 - 597962 | 36156.9 |
| thioredoxin-dependent thiol peroxidase | NQ491_02465 | P44411 | - | 598131 - 598592 | 17263.7 |
| chromosomal replication initiator protein dnaa | NQ491_02470 | A6GYW8 | - | 598774 - 600186 | 53141.8 |
| phospho-sugar mutase | NQ491_02475 | P18159 | + | 600408 - 602153 | 65338.8 |
| hit family protein | NQ491_02480 | P49774 | + | 602189 - 602575 | 14776.1 |
| helix-turn-helix domain-containing protein | NQ491_02485 | Not Available | + | 603248 - 603700 | 16950.2 |
| hypothetical protein | NQ491_02490 | Not Available | - | 605567 - 608416 | 106607.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.