Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing gmp synthase | NQ491_02195 | Q5LGV6 | + | 539208 - 540737 | 56810.6 |
| cggc domain-containing protein | NQ491_02200 | Q58002 | - | 540882 - 541232 | 13007.0 |
| uracil-dna glycosylase | NQ491_02205 | A6L7T5 | - | 541418 - 542080 | 25369.1 |
| duf2461 domain-containing protein | NQ491_02210 | Not Available | + | 542286 - 542960 | 25801.3 |
| flotillin-like protein floa | NQ491_02215 | A6LDT3 | - | 543277 - 544242 | 34522.4 |
| nfed family protein | NQ491_02220 | Not Available | - | 544296 - 544811 | 18169.4 |
| hypothetical protein | NQ491_02225 | Not Available | - | 544917 - 546356 | 53597.3 |
| trkh family potassium uptake protein | NQ491_02230 | E1V6C5 | - | 546507 - 547952 | 52451.4 |
| mcp four helix bundle domain-containing protein | NQ491_02235 | Not Available | - | 547966 - 548718 | 28368.5 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | NQ491_02240 | P54462 | - | 548777 - 550078 | 47851.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.