Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine--trna ligase | NQ491_10250 | Q2S1G4 | - | 2539020 - 2540291 | 47113.3 |
| glutaminyl-peptide cyclotransferase | NQ491_10255 | Q84WV9 | + | 2540483 - 2541574 | 39500.8 |
| methionine synthase | NQ491_10260 | Q87L95 | + | 2541635 - 2545297 | 133706.0 |
| methylenetetrahydrofolate reductase | NQ491_10265 | O67422 | + | 2545312 - 2546274 | 35599.8 |
| m20 family metallopeptidase | NQ491_10270 | P54984 | + | 2546869 - 2548050 | 42278.6 |
| 50s ribosomal protein l20 | NQ491_10275 | B3ERW1 | - | 2548818 - 2549162 | 12923.9 |
| 50s ribosomal protein l35 | NQ491_10280 | A6L9S4 | - | 2549262 - 2549456 | 7249.07 |
| hypothetical protein | NQ491_10285 | Not Available | - | 2549602 - 2549748 | 5379.41 |
| tyrosine-type recombinase/integrase | NQ491_10290 | Q9EXN5 | - | 2549734 - 2549889 | 5864.44 |
| s41 family peptidase | NQ491_10295 | Q44879 | - | 2549940 - 2551367 | 54569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.