Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | NQ491_09850 | Q7MSI8 | - | 2447755 - 2448210 | 17275.0 |
| peptidoglycan dd-metalloendopeptidase family protein | NQ491_09855 | P0AFT0 | - | 2448207 - 2449535 | 48689.2 |
| 3-deoxy-8-phosphooctulonate synthase | NQ491_09860 | Q1IKD0 | - | 2449761 - 2450567 | 29172.6 |
| replication-associated recombination protein a | NQ491_09865 | P39918 | - | 2451019 - 2452293 | 47506.0 |
| metallophosphatase family protein | NQ491_09870 | O27802 | + | 2452358 - 2452861 | 18776.5 |
| atp-dependent clp protease atp-binding subunit | NQ491_09875 | Q2YSD6 | + | 2452917 - 2455469 | 94696.6 |
| mate family efflux transporter | NQ491_09880 | Q98D15 | + | 2455847 - 2457217 | 50047.9 |
| carboxylesterase family protein | NQ491_09885 | D2D3B6 | - | 2457607 - 2458602 | 36097.9 |
| ribonuclease z | NQ491_09890 | Q89ZN1 | - | 2459260 - 2460222 | 35553.8 |
| 30s ribosomal protein s1 | NQ491_09895 | Q9Z8M3 | - | 2460236 - 2462080 | 68457.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.