Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | NQ491_09600 | P9WPZ0 | - | 2385536 - 2386636 | 40850.0 |
| mate family efflux transporter | NQ491_09605 | P28303 | + | 2387271 - 2388560 | 47480.1 |
| hypothetical protein | NQ491_09610 | Not Available | - | 2388846 - 2389811 | 35091.5 |
| ribose 5-phosphate isomerase b | NQ491_09615 | P37351 | - | 2389922 - 2390380 | 16741.8 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | NQ491_09620 | Q8A7Z7 | - | 2390450 - 2391052 | 22101.4 |
| imidazole glycerol phosphate synthase subunit hisf | NQ491_09625 | Q64RT2 | - | 2391049 - 2391804 | 27147.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | NQ491_09630 | Q11VM2 | - | 2391945 - 2392679 | 26458.6 |
| imidazole glycerol phosphate synthase subunit hish | NQ491_09635 | Q64RT0 | - | 2392676 - 2393257 | 21352.5 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | NQ491_09640 | Q5LB00 | - | 2393254 - 2394378 | 42029.1 |
| histidinol-phosphate transaminase | NQ491_09645 | A6L2V8 | - | 2394375 - 2395415 | 38970.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.