Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 9 protein | NQ491_09400 | Q57336 | + | 2323463 - 2324539 | 39805.3 |
| endonuclease/exonuclease/phosphatase family protein | NQ491_09405 | Not Available | + | 2324729 - 2325817 | 40602.6 |
| glycine cleavage system protein gcvh | NQ491_09410 | A6LGR3 | + | 2325922 - 2326299 | 13662.9 |
| malate dehydrogenase | NQ491_09415 | A6L903 | + | 2326380 - 2327321 | 33119.4 |
| ragb/susd family nutrient uptake outer membrane protein | NQ491_09420 | T2KNB8 | - | 2328306 - 2330084 | 66710.3 |
| susc/raga family tonb-linked outer membrane protein | NQ491_09425 | T2KM18 | - | 2330127 - 2333198 | 115478.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ491_09430 | Not Available | - | 2333238 - 2335178 | 73435.0 |
| tonb-dependent receptor | NQ491_09435 | T2KPJ3 | - | 2335198 - 2338437 | 120497.0 |
| ftsl-like putative cell division protein | NQ491_09440 | Not Available | + | 2339162 - 2339596 | 16881.5 |
| transpeptidase family protein | NQ491_09445 | L0T911 | + | 2339600 - 2341804 | 81252.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.