Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_09150 | Not Available | - | 2261539 - 2261892 | 13621.1 |
| helix-turn-helix domain-containing protein | NQ491_09155 | Not Available | - | 2261876 - 2262202 | 13474.3 |
| toprim domain-containing protein | NQ491_09160 | Not Available | - | 2262217 - 2264262 | 76710.2 |
| helix-turn-helix domain-containing protein | NQ491_09165 | Not Available | - | 2264225 - 2264590 | 14758.7 |
| rtec domain-containing protein | NQ491_09170 | Not Available | - | 2264936 - 2265238 | 11606.2 |
| hypothetical protein | NQ491_09175 | Not Available | - | 2265240 - 2265512 | 9973.03 |
| hypothetical protein | NQ491_09180 | Not Available | + | 2265929 - 2266183 | 9184.06 |
| efflux transporter outer membrane subunit | NQ491_09185 | O31101 | - | 2266383 - 2267774 | 51613.7 |
| multidrug efflux rnd transporter permease subunit | NQ491_09190 | Q8G2M6 | - | 2267771 - 2270863 | 112730.0 |
| efflux rnd transporter periplasmic adaptor subunit | NQ491_09195 | Q8G2M7 | - | 2270867 - 2272102 | 45861.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.