Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | NQ491_08950 | Q45585 | - | 2218188 - 2218763 | 22860.0 |
| hypothetical protein | NQ491_08955 | Not Available | - | 2218754 - 2219932 | 44328.2 |
| trna guanosine(34) transglycosylase tgt | NQ491_08960 | B8I6M0 | + | 2220026 - 2221156 | 41955.2 |
| lptf/lptg family permease | NQ491_08965 | Not Available | + | 2221269 - 2222363 | 41590.0 |
| hypothetical protein | NQ491_08970 | Not Available | - | 2222599 - 2223156 | 20909.8 |
| carbon starvation protein a | NQ491_08975 | O86233 | - | 2223247 - 2224722 | 53591.5 |
| osmc family protein | NQ491_08980 | Not Available | - | 2224805 - 2225212 | 14483.6 |
| hypothetical protein | NQ491_08985 | Not Available | - | 2225352 - 2226281 | 35097.2 |
| hypothetical protein | NQ491_08990 | Not Available | + | 2226270 - 2226485 | 8373.9 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | NQ491_08995 | B2RL89 | + | 2226581 - 2227186 | 22570.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.