Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_08850 | Not Available | + | 2193306 - 2193974 | 25126.4 |
| hypothetical protein | NQ491_08855 | Not Available | + | 2193998 - 2195551 | 57246.0 |
| bifunctional gnat family n-acetyltransferase/carbon-nitrogen hydrolase family protein | NQ491_08860 | P54608 | - | 2195776 - 2197308 | 59327.0 |
| hypothetical protein | NQ491_08865 | Not Available | + | 2198232 - 2198624 | 15174.7 |
| zinc metallopeptidase | NQ491_08870 | O05248 | - | 2198783 - 2199469 | 24633.1 |
| sdr family nad(p)-dependent oxidoreductase | NQ491_08875 | P69935 | - | 2199559 - 2200338 | 28307.0 |
| abc transporter permease | NQ491_08880 | Q9PEF2 | + | 2200485 - 2201738 | 46900.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | NQ491_08885 | Q5LH04 | + | 2201749 - 2202498 | 27856.5 |
| hypothetical protein | NQ491_08890 | Not Available | + | 2202501 - 2203001 | 17901.9 |
| hypothetical protein | NQ491_08895 | Not Available | + | 2202998 - 2203510 | 19042.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.