Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fimb/mfa2 family fimbrial subunit | NQ491_08800 | Not Available | - | 2185144 - 2185968 | 29104.3 |
| hypothetical protein | NQ491_08805 | Not Available | - | 2185981 - 2187021 | 38263.0 |
| duf3575 domain-containing protein | NQ491_08810 | Not Available | - | 2187036 - 2188052 | 38162.7 |
| tyrosine-type recombinase/integrase | NQ491_08815 | P68573 | + | 2189134 - 2189403 | 9846.12 |
| nifb/nifx family molybdenum-iron cluster-binding protein | NQ491_08820 | Q58000 | + | 2189678 - 2190073 | 13883.5 |
| hypothetical protein | NQ491_08825 | Not Available | + | 2190085 - 2190288 | 7184.96 |
| hypothetical protein | NQ491_08830 | Not Available | + | 2190341 - 2190481 | 4838.81 |
| pepsy-like domain-containing protein | NQ491_08835 | Not Available | + | 2190810 - 2191661 | 32622.8 |
| hypothetical protein | NQ491_08840 | Not Available | + | 2191753 - 2192286 | 21197.5 |
| hypothetical protein | NQ491_08845 | Not Available | + | 2192589 - 2193278 | 26657.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.